No, dealers expect Broncos to be modded
A big turbo with a custom ecu tune voids warranty, and then there's the moss magnuson warranty act, so you'll be fine.
You said you live in Phoenix, definitely do the Intercooler and charge pipes first. I did those, still rocking the stock radiator for...
Mishimoto has a specific Radiator and Intercooler with Charge pipes
That said, CSF is slightly cheaper and there's more than mishimoto for Intercoolers